Publications

336 entries « 2 of 17 »

Srikanthan, Dilakshan; Kaufmann, Martin; Jamzad, Amoon; Syeda, Ayesha; Santilli, Alice; Sedghi, Alireza; Fichtinger, Gabor; Purzner, Jamie; Rudan, John; Purzner, Teresa; Mousavi, Parvin

Attention-based multi-instance learning for improved glioblastoma detection using mass spectrometry Proceedings Article

In: pp. 248-253, SPIE, 2023.

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Morton, David; Connolly, Laura; Groves, Leah; Sunderland, Kyle; Jamzad, Amoon; Rudan, John F; Fichtinger, Gabor; Ungi, Tamas; Mousavi, Parvin

Tracked tissue sensing for tumor bed inspection Proceedings Article

In: pp. 378-385, SPIE, 2023.

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Elmi, Hanad; Jamzad, Amoon; Sharp, Mackenzie; Rodgers, Jessica R; Kaufmann, Martin; Jamaspishvili, Tamara; Iseman, Rachael; Berman, David; Rudan, J; Fichtinger, Gabor; Mousavi, Parvin

ViPRE: an open-source software implementation for end-to-end analysis of mass spectrometry data Proceedings Article

In: pp. 487-494, SPIE, 2023.

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Ndiaye, Fatou Bintou; Groves, Leah; Hisey, Rebecca; Ungi, Tamas; Diop, Idy; Mousavi, Parvin; Fichtinger, Gabor; Camara, Mamadou Samba

Desing and realization of a computer-assisted nephrostomy guidance system Journal Article

In: pp. 1-6, 2023.

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Fooladgar, Fahimeh; to, Minh Nguyen Nhat; Javadi, Golara; Sojoudi, Samira; Eshumani, Walid; Chang, Silvia; Black, Peter; Mousavi, Parvin; Abolmaesumi, Purang

Semi-supervised learning from coarse histopathology labels Journal Article

In: Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, vol. 11, no. 4, pp. 1143-1150, 2023.

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Zhou, Meng; Jamzad, Amoon; Izard, Jason; Menard, Alexandre; Siemens, Robert; Mousavi, Parvin

Domain Transfer Through Image-to-Image Translation for Uncertainty-Aware Prostate Cancer Classification Journal Article

In: arXiv preprint arXiv:2307.00479, 2023.

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Gilany, Mahdi; Wilson, Paul; Perera-Ortega, Andrea; Jamzad, Amoon; To, Minh Nguyen Nhat; Fooladgar, Fahimeh; Wodlinger, Brian; Abolmaesumi, Purang; Mousavi, Parvin

TRUSformer: Improving prostate cancer detection from micro-ultrasound using attention and self-supervision Journal Article

In: International Journal of Computer Assisted Radiology and Surgery, vol. 18, no. 7, pp. 1193-1200, 2023.

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Groves, Leah A; Keita, Mohamed; Talla, Saidou; Kikinis, Ron; Fichtinger, Gabor; Mousavi, Parvin; Camara, Mamadou

A review of low-cost ultrasound compatible phantoms Journal Article

In: vol. 70, no. 12, pp. 3436-3448, 2023.

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March, Lucas; Rodgers, Jessica R; Hisey, Rebecca; Jamzad, Amoon; Santilli, Alice ML; McKay, Doug; Rudan, John F; Kaufmann, Martin; Ren, Kevin Yi Mi; Fichtinger, Gabor; Mousavi, Parvin

Cautery tool state detection using deep learning on intraoperative surgery videos Proceedings Article

In: pp. 89-95, SPIE, 2023.

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Yeung, Chris; Ehrlich, Joshua; Jamzad, Amoon; Kaufmann, Martin; Rudan, John; Engel, Cecil Jay; Mousavi, Parvin; Ungi, Tamas; Fichtinger, Gabor

Cautery trajectory analysis for evaluation of resection margins in breast-conserving surgery Proceedings Article

In: pp. 495-501, SPIE, 2023.

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Syeda, Ayesha; Fooladgar, Fahimeh; Jamzad, Amoon; Srikanthan, Dilakshan; Kaufmann, Martin; Ren, Kevin; Engel, Jay; Walker, Ross; Merchant, Shaila; McKay, Doug; Varma, Sonal; Fichtinger, Gabor; Rudan, John; Mousavi, Parvin

Self-supervised learning and uncertainty estimation for surgical margin detection Proceedings Article

In: pp. 76-83, SPIE, 2023.

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Radcliffe, Olivia; Connolly, Laura; Ungi, Tamas; Yeo, Caitlin; Rudan, John F; Fichtinger, Gabor; Mousavi, Parvin

Navigated surgical resection cavity inspection for breast conserving surgery Proceedings Article

In: pp. 234-241, SPIE, 2023.

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Ehrlich, Josh; Yeung, Chris; Kaufman, Martin; Jamzad, Amoon; Rudan, J; Mousavi, Parvin; Fichtinger, Gabor; Ungi, Tamas

Determining the time-delay of a mass spectrometry-based tissue sensor Proceedings Article

In: pp. 324-327, SPIE, 2023.

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Greenspan, Hayit; Madabhushi, Anant; Mousavi, Parvin; Salcudean, Septimiu; Duncan, James; Syeda-Mahmood, Tanveer; Taylor, Russell

Medical Image Computing and Computer Assisted Intervention–MICCAI 2023: 26th International Conference, Vancouver, BC, Canada, October 8–12, 2023, Proceedings, Part V Journal Article

In: vol. 14224, 2023.

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Jamzad, Amoon; Fooladgar, Fahimeh; Connolly, Laura; Srikanthan, Dilakshan; Syeda, Ayesha; Kaufmann, Martin; Ren, Kevin YM; Merchant, Shaila; Engel, Jay; Varma, Sonal; Fichtinger, Gabor; Rudan, John F; Mousavi, Parvin

Bridging Ex-Vivo Training and Intra-operative Deployment for Surgical Margin Assessment with Evidential Graph Transformer Proceedings Article

In: pp. 562-571, Springer Nature Switzerland, 2023.

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Tomalty, Diane; Giovannetti, Olivia; Velikonja, Leah; Munday, Jasica; Kaufmann, Martin; Iaboni, Natasha; Jamzad, Amoon; Rubino, Rachel; Fichtinger, Gabor; Mousavi, Parvin; Nicol, Christopher JB; Rudan, John F; Adams, Michael A

Molecular characterization of human peripheral nerves using desorption electrospray ionization mass spectrometry imaging Journal Article

In: Journal of Anatomy, vol. 243, no. 5, pp. 758-769, 2023.

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Imtiaz, Tashifa; Nanayakkara, Jina; Fang, Alexis; Jomaa, Danny; Mayotte, Harrison; Damiani, Simona; Javed, Fiza; Jones, Tristan; Kaczmarek, Emily; Adebayo, Flourish Omolara; Imtiaz, Uroosa; Li, Yiheng; Zhang, Richard; Mousavi, Parvin; Renwick, Neil; Tyryshkin, Kathrin

A user-driven machine learning approach for RNA-based sample discrimination and hierarchical classification Journal Article

In: STAR Protocols, vol. 4, no. 4, pp. 102661, 2023.

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Gilany, Mahdi; Wilson, Paul; Jamzad, Amoon; Fooladgar, Fahimeh; To, Minh Nguyen Nhat; Wodlinger, Brian; Abolmaesumi, Purang; Mousavi, Parvin

Towards Confident Detection of Prostate Cancer using High Resolution Micro-ultrasound Proceedings Article Forthcoming

In: Medical Image Computing and Computer Assisted Interventions (MICCAI 2022), Forthcoming.

BibTeX

Javadi, Golara; Samadi, Samareh; Bayat, Sharareh; Sojoudi, Samira; Hurtado, Antonio; Eshumani, Walid; Chang, Silvia; Black, Peter; Mousavi, Parvin; Abolmaesumi, Purang

Training Deep Neural Networks with Noisy Clinical Labels: Towards Accurate Detection of Prostate Cancer in US Data Journal Article

In: International Journal of Computer Assisted Radiology and Surgery (IJCARS), 2022.

BibTeX

Hu, Zoe; Fauerbach, Paola Nasute; Yeung, Chris; Ungi, Tamas; Rudan, John; Engel, Cecil Jay; Mousavi, Parvin; Fichtinger, Gabor; Jabs, Doris

Real-time automatic tumor segmentation for ultrasound-guided breast-conserving surgery navigation Journal Article

In: International Journal of Computer Assisted Radiology and Surgery (IJCARS), 2022.

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336 entries « 2 of 17 »
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