{"id":2365,"date":"2024-03-09T15:50:32","date_gmt":"2024-03-09T15:50:32","guid":{"rendered":"https:\/\/labs.cs.queensu.ca\/perklab\/members\/ehasn-dehghan\/"},"modified":"2024-03-09T15:50:32","modified_gmt":"2024-03-09T15:50:32","slug":"ehasn-dehghan","status":"publish","type":"qsc_member","link":"https:\/\/labs.cs.queensu.ca\/perklab\/members\/ehasn-dehghan\/","title":{"rendered":"Ehasn Dehghan"},"content":{"rendered":"<div class=\"wp-block-columns is-layout-flex wp-block-columns-is-layout-flex qsc-member-single-core-info-container\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow qsc-member-single-photo-column\">\n\t\t<img loading=\"lazy\" decoding=\"async\" width=\"192\" height=\"250\" src=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/03\/EhsanDehghan.jpg\" class=\"qsc-member-single-photo wp-post-image\" alt=\"\" srcset=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/03\/EhsanDehghan.jpg 368w, https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/03\/EhsanDehghan-230x300.jpg 230w\" sizes=\"auto, (max-width: 192px) 100vw, 192px\" \/>\n\t<\/div>\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow qsc-member-single-info-column\">\n<div class=\"qsc-member-name\">\n<h1>Ehasn Dehghan<\/h1>\n<\/div>\n<div class=\"qsc-member-position\">Postdoctoral Fellow<\/div>\n<div class=\"qsc-member-department\">School of Computing<\/div>\n<div class=\"qsc-member-organization\">Queen&#8217;s University<\/div>\n<div class=\"qsc-member-date-range\">Member from <em>2010<\/em> to <em>2012<\/em><\/div>\n<div class=\"qsc-member-contact\">\n<div class=\"qsc-member-socials\">\n\t\t\t<\/div>\n<\/p><\/div>\n<\/p><\/div>\n<\/div>\n<div class=\"qsc-member-bio\">\n<div class=\"teachpress_pub_list\"><form name=\"tppublistform\" method=\"get\"><a name=\"tppubs\" id=\"tppubs\"><\/a><\/form><div class=\"teachpress_publication_list\"><div class=\"tp_publication tp_publication_conference\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Le, Yi;  Lee, Junghoon;  Song, Danny Y;  Fichtinger, Gabor;  Prince, Jerry L.<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Ehsan_ISBI_2016.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Ehsan_ISBI_2016.pdf\" target=\"blank\">CT AND MRI FUSION FOR POSTIMPLANT PROSTATE BRACHYTHERAPY EVALUATION<\/a> <span class=\"tp_pub_type tp_  conference\">Conference<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_booktitle\">IEEE Int. Symp on Biomedical Imaging, <\/span><span class=\"tp_pub_additional_year\">2016<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_155\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('155','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_155\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('155','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_155\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('155','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_155\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@conference{Dehghan2016,<br \/>\r\ntitle = {CT AND MRI FUSION FOR POSTIMPLANT PROSTATE BRACHYTHERAPY EVALUATION},<br \/>\r\nauthor = {Ehsan Dehghan and Yi Le and Junghoon Lee and Danny Y Song and Gabor Fichtinger and Jerry L. Prince},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Ehsan_ISBI_2016.pdf},<br \/>\r\nyear  = {2016},<br \/>\r\ndate = {2016-04-01},<br \/>\r\nurldate = {2016-04-01},<br \/>\r\nbooktitle = {IEEE Int. Symp on Biomedical Imaging},<br \/>\r\npages = {625-628},<br \/>\r\nabstract = {&lt;p&gt;Postoperative evaluation of prostate brachytherapy is typically&lt;br \/&gt; <br \/>\r\nperformed using CT, which does not have sufficient&lt;br \/&gt; <br \/>\r\nsoft tissue contrast for accurate anatomy delineation. MR-CT&lt;br \/&gt; <br \/>\r\nfusion enables more accurate localization of both anatomy&lt;br \/&gt; <br \/>\r\nand implanted radioactive seeds, and hence, improves the&lt;br \/&gt; <br \/>\r\naccuracy of postoperative dosimetry. We propose a method&lt;br \/&gt; <br \/>\r\nfor automatic registration of MR and CT images without a&lt;br \/&gt; <br \/>\r\nneed for manual initialization. Our registration method employs&lt;br \/&gt; <br \/>\r\na point-to-volume registration scheme during which&lt;br \/&gt; <br \/>\r\nlocalized seeds in the CT images, produced by commercial&lt;br \/&gt; <br \/>\r\ntreatment planning systems as part of the standard of care,&lt;br \/&gt; <br \/>\r\nare rigidly registered to preprocessed MRI images. We tested&lt;br \/&gt; <br \/>\r\nour algorithm on ten patient data sets and achieved an overall&lt;br \/&gt; <br \/>\r\nregistration error of 1.6 \u00b1 0.8mm with a running time of less&lt;br \/&gt; <br \/>\r\nthan 20s. With high registration accuracy and computational&lt;br \/&gt; <br \/>\r\nspeed, and no need for manual intervention, our method has&lt;br \/&gt; <br \/>\r\nthe potential to be employed in clinical applications.&lt;\/p&gt;},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {conference}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('155','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_155\" style=\"display:none;\"><div class=\"tp_abstract_entry\">&lt;p&gt;Postoperative evaluation of prostate brachytherapy is typically&lt;br \/&gt; <br \/>\r\nperformed using CT, which does not have sufficient&lt;br \/&gt; <br \/>\r\nsoft tissue contrast for accurate anatomy delineation. MR-CT&lt;br \/&gt; <br \/>\r\nfusion enables more accurate localization of both anatomy&lt;br \/&gt; <br \/>\r\nand implanted radioactive seeds, and hence, improves the&lt;br \/&gt; <br \/>\r\naccuracy of postoperative dosimetry. We propose a method&lt;br \/&gt; <br \/>\r\nfor automatic registration of MR and CT images without a&lt;br \/&gt; <br \/>\r\nneed for manual initialization. Our registration method employs&lt;br \/&gt; <br \/>\r\na point-to-volume registration scheme during which&lt;br \/&gt; <br \/>\r\nlocalized seeds in the CT images, produced by commercial&lt;br \/&gt; <br \/>\r\ntreatment planning systems as part of the standard of care,&lt;br \/&gt; <br \/>\r\nare rigidly registered to preprocessed MRI images. We tested&lt;br \/&gt; <br \/>\r\nour algorithm on ten patient data sets and achieved an overall&lt;br \/&gt; <br \/>\r\nregistration error of 1.6 \u00b1 0.8mm with a running time of less&lt;br \/&gt; <br \/>\r\nthan 20s. With high registration accuracy and computational&lt;br \/&gt; <br \/>\r\nspeed, and no need for manual intervention, our method has&lt;br \/&gt; <br \/>\r\nthe potential to be employed in clinical applications.&lt;\/p&gt;<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('155','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_155\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Ehsan_ISBI_2016.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Ehsan_ISBI[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Ehsan_ISBI[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('155','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Le, Yi;  Lee, Junghoon;  Song, Daniel Y;  Fichtinger, Gabor;  Prince, Jerry L<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/7493345\/\" title=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/7493345\/\" target=\"blank\">CT and MRI fusion for postimplant prostate brachytherapy evaluation<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_pages\">pp. 625-628, <\/span><span class=\"tp_pub_additional_year\">2016<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_859\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('859','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_859\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('859','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_859\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('859','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_859\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2016h,<br \/>\r\ntitle = {CT and MRI fusion for postimplant prostate brachytherapy evaluation},<br \/>\r\nauthor = {Ehsan Dehghan and Yi Le and Junghoon Lee and Daniel Y Song and Gabor Fichtinger and Jerry L Prince},<br \/>\r\nurl = {https:\/\/ieeexplore.ieee.org\/abstract\/document\/7493345\/},<br \/>\r\nyear  = {2016},<br \/>\r\ndate = {2016-01-01},<br \/>\r\npages = {625-628},<br \/>\r\npublisher = {IEEE},<br \/>\r\nabstract = {Postoperative evaluation of prostate brachytherapy is typically performed using CT, which does not have sufficient soft tissue contrast for accurate anatomy delineation. MR-CT fusion enables more accurate localization of both anatomy and implanted radioactive seeds, and hence, improves the accuracy of postoperative dosimetry. We propose a method for automatic registration of MR and CT images without a need for manual initialization. Our registration method employs a point-to-volume registration scheme during which localized seeds in the CT images, produced by commercial treatment planning systems as part of the standard of care, are rigidly registered to preprocessed MRI images. We tested our algorithm on ten patient data sets and achieved an overall registration error of 1.6 \u00b1 0.8 mm with a running time of less than 20s. With high registration accuracy and computational speed, and no need for manual \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('859','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_859\" style=\"display:none;\"><div class=\"tp_abstract_entry\">Postoperative evaluation of prostate brachytherapy is typically performed using CT, which does not have sufficient soft tissue contrast for accurate anatomy delineation. MR-CT fusion enables more accurate localization of both anatomy and implanted radioactive seeds, and hence, improves the accuracy of postoperative dosimetry. We propose a method for automatic registration of MR and CT images without a need for manual initialization. Our registration method employs a point-to-volume registration scheme during which localized seeds in the CT images, produced by commercial treatment planning systems as part of the standard of care, are rigidly registered to preprocessed MRI images. We tested our algorithm on ten patient data sets and achieved an overall registration error of 1.6 \u00b1 0.8 mm with a running time of less than 20s. With high registration accuracy and computational speed, and no need for manual \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('859','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_859\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/7493345\/\" title=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/7493345\/\" target=\"_blank\">https:\/\/ieeexplore.ieee.org\/abstract\/document\/7493345\/<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('859','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Li, Yi;  Burdette, E. Clif;  Prince, Jerry L.;  Fichtinger, Gabor;  Lee, Junghoon;  Song, Danny Y;  Kuo, Nathanael;  Dehghan, Ehsan;  Degeut, Anton;  Mian, Omar<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"http:\/\/dx.doi.org\/10.1118\/1.4893761\" title=\"http:\/\/dx.doi.org\/10.1118\/1.4893761\" target=\"blank\">An image-guidance system for dynamic dose calculation in prostate brachytherapy using ultrasound and fluoroscopy<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Medical Physics, <\/span><span class=\"tp_pub_additional_volume\">vol. 41, <\/span><span class=\"tp_pub_additional_year\">2014<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_228\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('228','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_228\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('228','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_228\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{Kuo2014,<br \/>\r\ntitle = {An image-guidance system for dynamic dose calculation in prostate brachytherapy using ultrasound and fluoroscopy},<br \/>\r\nauthor = {Yi Li and E. Clif Burdette and Jerry L. Prince and Gabor Fichtinger and Junghoon Lee and Danny Y Song and Nathanael Kuo and Ehsan Dehghan and Anton Degeut and Omar Mian},<br \/>\r\nurl = {http:\/\/dx.doi.org\/10.1118\/1.4893761<br \/>\r\nhttps:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Kuo_MedPhys2014.pdf},<br \/>\r\nyear  = {2014},<br \/>\r\ndate = {2014-08-01},<br \/>\r\nurldate = {2014-08-01},<br \/>\r\njournal = {Medical Physics},<br \/>\r\nvolume = {41},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('228','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_228\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"http:\/\/dx.doi.org\/10.1118\/1.4893761\" title=\"http:\/\/dx.doi.org\/10.1118\/1.4893761\" target=\"_blank\">http:\/\/dx.doi.org\/10.1118\/1.4893761<\/a><\/li><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Kuo_MedPhys2014.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Kuo_MedPhy[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Kuo_MedPhy[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('228','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Kuo, Nathanael;  Deguet, Anton;  Le, Yi;  Armour, Elwood;  Burdette, E Clif;  Song, Danny Y;  Fichtinger, Gabor;  Prince, Jerry L;  Lee, Junghoon<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-1-4614-8498-1_23\" title=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-1-4614-8498-1_23\" target=\"blank\">Ultrasound-fluoroscopy registration for intraoperative dynamic dosimetry in prostate brachytherapy<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Abdomen and Thoracic Imaging: An Engineering &amp; Clinical Perspective, <\/span><span class=\"tp_pub_additional_pages\">pp. 587-621, <\/span><span class=\"tp_pub_additional_year\">2014<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_965\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('965','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_965\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('965','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_965\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('965','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_965\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2014o,<br \/>\r\ntitle = {Ultrasound-fluoroscopy registration for intraoperative dynamic dosimetry in prostate brachytherapy},<br \/>\r\nauthor = {Ehsan Dehghan and Nathanael Kuo and Anton Deguet and Yi Le and Elwood Armour and E Clif Burdette and Danny Y Song and Gabor Fichtinger and Jerry L Prince and Junghoon Lee},<br \/>\r\nurl = {https:\/\/link.springer.com\/chapter\/10.1007\/978-1-4614-8498-1_23},<br \/>\r\nyear  = {2014},<br \/>\r\ndate = {2014-01-01},<br \/>\r\njournal = {Abdomen and Thoracic Imaging: An Engineering & Clinical Perspective},<br \/>\r\npages = {587-621},<br \/>\r\npublisher = {Springer US},<br \/>\r\nabstract = {Low-dose-rate prostate brachytherapy is a treatment option for low- and mid-risk prostate cancer through introduction of radioactive seeds into the prostate. Seed placement deviations are common and associated with postoperative complications. Dynamic dosimetry is a method to accurately localize the true position of the seeds inside the tissue, calculate the delivered dose, and adapt the implant plan accordingly to compensate for seed placement deviations in the operating room. A practical method for dynamic dosimetry relies on localization of the implanted seeds in 3D space from several C-arm images and registering them to a 3D ultrasound volume of the prostate region. In this chapter we introduce a system and workflow for intraoperative dosimetry for prostate brachytherapy. In the suggested workflow, C-arm images are acquired from different angles and are used to reconstruct the seeds in 3D space \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('965','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_965\" style=\"display:none;\"><div class=\"tp_abstract_entry\">Low-dose-rate prostate brachytherapy is a treatment option for low- and mid-risk prostate cancer through introduction of radioactive seeds into the prostate. Seed placement deviations are common and associated with postoperative complications. Dynamic dosimetry is a method to accurately localize the true position of the seeds inside the tissue, calculate the delivered dose, and adapt the implant plan accordingly to compensate for seed placement deviations in the operating room. A practical method for dynamic dosimetry relies on localization of the implanted seeds in 3D space from several C-arm images and registering them to a 3D ultrasound volume of the prostate region. In this chapter we introduce a system and workflow for intraoperative dosimetry for prostate brachytherapy. In the suggested workflow, C-arm images are acquired from different angles and are used to reconstruct the seeds in 3D space \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('965','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_965\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-1-4614-8498-1_23\" title=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-1-4614-8498-1_23\" target=\"_blank\">https:\/\/link.springer.com\/chapter\/10.1007\/978-1-4614-8498-1_23<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('965','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Filippo, Chiara Amat San;  Fichtinger, Gabor;  Morris, William James;  Salcudean, Septimiu E;  Dehghan, Ehsan;  Fallavollita, Pascal<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/link.springer.com\/article\/10.1007\/s11548-014-0983-2\" title=\"https:\/\/link.springer.com\/article\/10.1007\/s11548-014-0983-2\" target=\"blank\">Intraoperative segmentation of iodine and palladium radioactive sources in C-arm images<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">International journal of computer assisted radiology and surgery, <\/span><span class=\"tp_pub_additional_volume\">vol. 9, <\/span><span class=\"tp_pub_additional_pages\">pp. 769-776, <\/span><span class=\"tp_pub_additional_year\">2014<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_889\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('889','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_889\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('889','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_889\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('889','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_889\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2014m,<br \/>\r\ntitle = {Intraoperative segmentation of iodine and palladium radioactive sources in C-arm images},<br \/>\r\nauthor = {Chiara Amat San Filippo and Gabor Fichtinger and William James Morris and Septimiu E Salcudean and Ehsan Dehghan and Pascal Fallavollita},<br \/>\r\nurl = {https:\/\/link.springer.com\/article\/10.1007\/s11548-014-0983-2},<br \/>\r\nyear  = {2014},<br \/>\r\ndate = {2014-01-01},<br \/>\r\njournal = {International journal of computer assisted radiology and surgery},<br \/>\r\nvolume = {9},<br \/>\r\npages = {769-776},<br \/>\r\npublisher = {Springer Berlin Heidelberg},<br \/>\r\nabstract = {Purpose <br \/>\r\n Dynamic dosimetry is becoming the standard to evaluate the quality of radioactive implants during brachytherapy. For this, it is essential to obtain a 3D visualization of the implanted seeds and their relative position to the prostate. A method was developed to obtain a robust and precise segmentation of seeds in C-arm images, and this approach was tested using clinical datasets. <br \/>\r\nMethod <br \/>\r\n A region-based implicit active contour approach was used to delineate implanted seeds. Then, a template-based matching was employed to segment iodine implants whereas a K-means algorithm is implemented to resolve palladium seed clusters. To validate the method, 55 C-arm images from 10 patients were used for the segmentation of iodine sources, whereas 225 C-arm images from 16 patients were used for the palladium case \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('889','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_889\" style=\"display:none;\"><div class=\"tp_abstract_entry\">Purpose <br \/>\r\n Dynamic dosimetry is becoming the standard to evaluate the quality of radioactive implants during brachytherapy. For this, it is essential to obtain a 3D visualization of the implanted seeds and their relative position to the prostate. A method was developed to obtain a robust and precise segmentation of seeds in C-arm images, and this approach was tested using clinical datasets. <br \/>\r\nMethod <br \/>\r\n A region-based implicit active contour approach was used to delineate implanted seeds. Then, a template-based matching was employed to segment iodine implants whereas a K-means algorithm is implemented to resolve palladium seed clusters. To validate the method, 55 C-arm images from 10 patients were used for the segmentation of iodine sources, whereas 225 C-arm images from 16 patients were used for the palladium case \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('889','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_889\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/link.springer.com\/article\/10.1007\/s11548-014-0983-2\" title=\"https:\/\/link.springer.com\/article\/10.1007\/s11548-014-0983-2\" target=\"_blank\">https:\/\/link.springer.com\/article\/10.1007\/s11548-014-0983-2<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('889','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Kuo, Nathanael;  Dehghan, Ehsan;  Deguet, Anton;  Mian, Omar Y;  Le, Yi;  Burdette, E Clif;  Fichtinger, Gabor;  Prince, Jerry L;  Song, Danny Y;  Lee, Junghoon<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.4893761\" title=\"https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.4893761\" target=\"blank\">An image\u2010guidance system for dynamic dose calculation in prostate brachytherapy using ultrasound and fluoroscopy<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Medical physics, <\/span><span class=\"tp_pub_additional_volume\">vol. 41, <\/span><span class=\"tp_pub_additional_issue\">iss. 9, <\/span><span class=\"tp_pub_additional_pages\">pp. 091712, <\/span><span class=\"tp_pub_additional_year\">2014<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_779\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('779','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_779\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('779','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_779\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('779','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_779\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2014h,<br \/>\r\ntitle = {An image\u2010guidance system for dynamic dose calculation in prostate brachytherapy using ultrasound and fluoroscopy},<br \/>\r\nauthor = {Nathanael Kuo and Ehsan Dehghan and Anton Deguet and Omar Y Mian and Yi Le and E Clif Burdette and Gabor Fichtinger and Jerry L Prince and Danny Y Song and Junghoon Lee},<br \/>\r\nurl = {https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.4893761},<br \/>\r\nyear  = {2014},<br \/>\r\ndate = {2014-01-01},<br \/>\r\njournal = {Medical physics},<br \/>\r\nvolume = {41},<br \/>\r\nissue = {9},<br \/>\r\npages = {091712},<br \/>\r\npublisher = {American Association of Physicists in Medicine},<br \/>\r\nabstract = {Purpose: <br \/>\r\nBrachytherapy is a standard option of care for prostate cancer patients but may be improved by dynamic dose calculation based on localized seed positions. The American Brachytherapy Society states that the major current limitation of intraoperative treatment planning is the inability to localize the seeds in relation to the prostate. An image\u2010guidance system was therefore developed to localize seeds for dynamic dose calculation. <br \/>\r\nMethods: <br \/>\r\nThe proposed system is based on transrectal ultrasound (TRUS) and mobile C\u2010arm fluoroscopy, while using a simple fiducial with seed\u2010like markers to compute pose from the nonencoded C\u2010arm. Three or more fluoroscopic images and an ultrasound volume are acquired and processed by a pipeline of algorithms: (1) seed segmentation, (2) fiducial detection with pose estimation, (3) seed matching with reconstruction, and (4) fluoroscopy\u2010to\u2010TRUS registration \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('779','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_779\" style=\"display:none;\"><div class=\"tp_abstract_entry\">Purpose: <br \/>\r\nBrachytherapy is a standard option of care for prostate cancer patients but may be improved by dynamic dose calculation based on localized seed positions. The American Brachytherapy Society states that the major current limitation of intraoperative treatment planning is the inability to localize the seeds in relation to the prostate. An image\u2010guidance system was therefore developed to localize seeds for dynamic dose calculation. <br \/>\r\nMethods: <br \/>\r\nThe proposed system is based on transrectal ultrasound (TRUS) and mobile C\u2010arm fluoroscopy, while using a simple fiducial with seed\u2010like markers to compute pose from the nonencoded C\u2010arm. Three or more fluoroscopic images and an ultrasound volume are acquired and processed by a pipeline of algorithms: (1) seed segmentation, (2) fiducial detection with pose estimation, (3) seed matching with reconstruction, and (4) fluoroscopy\u2010to\u2010TRUS registration \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('779','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_779\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.4893761\" title=\"https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.4893761\" target=\"_blank\">https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.4893761<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('779','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_conference\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Filippo, Chiara Amat San;  Fichtinger, Gabor;  Morris, William J.;  Salcudean, Septimiu E.;  Dehghan, Ehsan;  Fallavollita, Pascal<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Filippo2013.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Filippo2013.pdf\" target=\"blank\">Declustering n-Connected Components for Segmentation of Iodine Implants in C-Arm Fluoroscopy Images<\/a> <span class=\"tp_pub_type tp_  conference\">Conference<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_booktitle\">Information Processing in Computer-Assisted Interventions (IPCAI), <\/span><span class=\"tp_pub_additional_organization\">Springer <\/span><span class=\"tp_pub_additional_publisher\">Springer, <\/span><span class=\"tp_pub_additional_address\">Heidelberg, Germany, June 26, 2013, <\/span><span class=\"tp_pub_additional_year\">2013<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_264\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('264','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_264\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('264','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_264\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@conference{Filippo2013,<br \/>\r\ntitle = {Declustering n-Connected Components for Segmentation of Iodine Implants in C-Arm Fluoroscopy Images},<br \/>\r\nauthor = {Chiara Amat San Filippo and Gabor Fichtinger and William J. Morris and Septimiu E. Salcudean and Ehsan Dehghan and Pascal Fallavollita},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Filippo2013.pdf},<br \/>\r\nyear  = {2013},<br \/>\r\ndate = {2013-06-01},<br \/>\r\nurldate = {2013-06-01},<br \/>\r\nbooktitle = {Information Processing in Computer-Assisted Interventions (IPCAI)},<br \/>\r\npages = {101-110},<br \/>\r\npublisher = {Springer},<br \/>\r\naddress = {Heidelberg, Germany, June 26, 2013},<br \/>\r\norganization = {Springer},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {conference}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('264','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_264\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Filippo2013.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Filippo201[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Filippo201[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('264','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Moradi, Mehdi;  Mahdavi, S. S.;  Dehghan, Ehsan;  Lobo, Julio R.;  Deshmukh, S.;  Morris, William J.;  Fichtinger, Gabor;  Salcudean, Septimiu E.<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/dx.doi.org\/10.1109\/TBME.2012.2206808\" title=\"Seed localization in ultrasound and registration to C-arm fluoroscopy using matched needle tracks for prostate brachytherapy.\" target=\"blank\">Seed localization in ultrasound and registration to C-arm fluoroscopy using matched needle tracks for prostate brachytherapy.<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">IEEE Transactions on Bio-Medical Engineering, <\/span><span class=\"tp_pub_additional_volume\">vol. 59, <\/span><span class=\"tp_pub_additional_pages\">pp. 2558 - 2567, <\/span><span class=\"tp_pub_additional_year\">2012<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_287\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('287','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_287\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('287','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_287\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('287','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_287\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{Moradi2012,<br \/>\r\ntitle = {Seed localization in ultrasound and registration to C-arm fluoroscopy using matched needle tracks for prostate brachytherapy.},<br \/>\r\nauthor = {Mehdi Moradi and S. S. Mahdavi and Ehsan Dehghan and Julio R. Lobo and S. Deshmukh and William J. Morris and Gabor Fichtinger and Septimiu E. Salcudean},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2012.pdf},<br \/>\r\ndoi = {10.1109\/TBME.2012.2206808},<br \/>\r\nyear  = {2012},<br \/>\r\ndate = {2012-06-01},<br \/>\r\nurldate = {2012-06-01},<br \/>\r\njournal = {IEEE Transactions on Bio-Medical Engineering},<br \/>\r\nvolume = {59},<br \/>\r\npages = {2558 - 2567},<br \/>\r\nabstract = {&lt;p&gt;We propose a novel fiducial-free approach for the registration of C-arm fluoroscopy to 3D ultrasound images of prostate brachytherapy implants to enable dosimetry. The approach involves the reliable detection of a subset of radioactive seeds from 3D ultrasound, and the use of needle tracks in both ultrasound and fluoroscopy for registration. Seed detection in ultrasound is achieved through template matching in 3D radio frequency ultrasound signals, followed by thresholding and spatial filtering. The resulting subset of seeds is registered to the complete reconstruction of the brachytherapy implant from multiple C-arm fluoroscopy views. To compensate for the deformation caused by the ultrasound probe, simulated warping is applied to the seed cloud from fluoroscopy. The magnitude of the applied warping is optimized within the registration process. The registration is performed in two stages. First, the needle track projections from fluoroscopy and ultrasound are matched. Only the seeds in the matched needles are then used as fiducials for point-based registration. We report results from a physical phantom with a realistic implant (average postregistration seed distance of 1.6\u00b11.2 mm) and from five clinical patient datasets (average error: 2.8\u00b11.5 mm over 128 detected seeds). We conclude that it is feasible to use RF ultrasound data, template matching, and spatial filtering to detect a reliable subset of brachytherapy seeds from ultrasound to enable registration to fluoroscopy for dosimetry.&lt;\/p&gt;},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('287','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_287\" style=\"display:none;\"><div class=\"tp_abstract_entry\">&lt;p&gt;We propose a novel fiducial-free approach for the registration of C-arm fluoroscopy to 3D ultrasound images of prostate brachytherapy implants to enable dosimetry. The approach involves the reliable detection of a subset of radioactive seeds from 3D ultrasound, and the use of needle tracks in both ultrasound and fluoroscopy for registration. Seed detection in ultrasound is achieved through template matching in 3D radio frequency ultrasound signals, followed by thresholding and spatial filtering. The resulting subset of seeds is registered to the complete reconstruction of the brachytherapy implant from multiple C-arm fluoroscopy views. To compensate for the deformation caused by the ultrasound probe, simulated warping is applied to the seed cloud from fluoroscopy. The magnitude of the applied warping is optimized within the registration process. The registration is performed in two stages. First, the needle track projections from fluoroscopy and ultrasound are matched. Only the seeds in the matched needles are then used as fiducials for point-based registration. We report results from a physical phantom with a realistic implant (average postregistration seed distance of 1.6\u00b11.2 mm) and from five clinical patient datasets (average error: 2.8\u00b11.5 mm over 128 detected seeds). We conclude that it is feasible to use RF ultrasound data, template matching, and spatial filtering to detect a reliable subset of brachytherapy seeds from ultrasound to enable registration to fluoroscopy for dosimetry.&lt;\/p&gt;<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('287','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_287\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2012.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2012[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2012[...]<\/a><\/li><li><i class=\"ai ai-doi\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/dx.doi.org\/10.1109\/TBME.2012.2206808\" title=\"Follow DOI:10.1109\/TBME.2012.2206808\" target=\"_blank\">doi:10.1109\/TBME.2012.2206808<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('287','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Lobo, Julio R.;  Moradi, Mehdi;  Chng, N.;  Dehghan, Ehsan;  Morris, William J.;  Fichtinger, Gabor;  Salcudean, Septimiu E.<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/dx.doi.org\/10.1109\/TMI.2011.2178254\" title=\"Use of Needle Track Detection to Quantify the Displacement of Stranded Seeds Following Prostate Brachytherapy\" target=\"blank\">Use of Needle Track Detection to Quantify the Displacement of Stranded Seeds Following Prostate Brachytherapy<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">IEEE Transactions on Medical Imaging, <\/span><span class=\"tp_pub_additional_volume\">vol. 31, <\/span><span class=\"tp_pub_additional_pages\">pp. 738 - 748, <\/span><span class=\"tp_pub_additional_year\">2012<\/span>, <span class=\"tp_pub_additional_issn\">ISSN: 1558-254X<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_298\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('298','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_298\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('298','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_298\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{Lobo2012,<br \/>\r\ntitle = {Use of Needle Track Detection to Quantify the Displacement of Stranded Seeds Following Prostate Brachytherapy},<br \/>\r\nauthor = {Julio R. Lobo and Mehdi Moradi and N. Chng and Ehsan Dehghan and William J. Morris and Gabor Fichtinger and Septimiu E. Salcudean},<br \/>\r\ndoi = {10.1109\/TMI.2011.2178254},<br \/>\r\nissn = {1558-254X},<br \/>\r\nyear  = {2012},<br \/>\r\ndate = {2012-03-01},<br \/>\r\nurldate = {2012-03-01},<br \/>\r\njournal = {IEEE Transactions on Medical Imaging},<br \/>\r\nvolume = {31},<br \/>\r\npages = {738 - 748},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('298','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_298\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"ai ai-doi\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/dx.doi.org\/10.1109\/TMI.2011.2178254\" title=\"Follow DOI:10.1109\/TMI.2011.2178254\" target=\"_blank\">doi:10.1109\/TMI.2011.2178254<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('298','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Moult, Eric;  Fichtinger, Gabor;  Morris, William J.;  Salcudean, Septimiu E.;  Dehghan, Ehsan;  Fallavollita, Pascal<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/dx.doi.org\/10.1007\/s11548-012-0679-4\" title=\"Segmentation of iodine brachytherapy implants in fluoroscopy\" target=\"blank\">Segmentation of iodine brachytherapy implants in fluoroscopy<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">International Journal of Computer Assisted Radiology and Surgery, <\/span><span class=\"tp_pub_additional_year\">2012<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_288\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('288','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_288\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('288','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_288\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{Moult2012b,<br \/>\r\ntitle = {Segmentation of iodine brachytherapy implants in fluoroscopy},<br \/>\r\nauthor = {Eric Moult and Gabor Fichtinger and William J. Morris and Septimiu E. Salcudean and Ehsan Dehghan and Pascal Fallavollita},<br \/>\r\nurl = {http:\/\/www.springerlink.com\/content\/kmn31823g053wj55\/},<br \/>\r\ndoi = {10.1007\/s11548-012-0679-4},<br \/>\r\nyear  = {2012},<br \/>\r\ndate = {2012-01-01},<br \/>\r\nurldate = {2012-01-01},<br \/>\r\njournal = {International Journal of Computer Assisted Radiology and Surgery},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('288','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_288\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"http:\/\/www.springerlink.com\/content\/kmn31823g053wj55\/\" title=\"http:\/\/www.springerlink.com\/content\/kmn31823g053wj55\/\" target=\"_blank\">http:\/\/www.springerlink.com\/content\/kmn31823g053wj55\/<\/a><\/li><li><i class=\"ai ai-doi\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/dx.doi.org\/10.1007\/s11548-012-0679-4\" title=\"Follow DOI:10.1007\/s11548-012-0679-4\" target=\"_blank\">doi:10.1007\/s11548-012-0679-4<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('288','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Moradi, Mehdi;  Mahdavi, S Sara;  Dehghan, Ehsan;  Lobo, Julio R;  Deshmukh, Sanchit;  Morris, William James;  Fichtinger, Gabor;  Salcudean, Septimiu E<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/6228521\/\" title=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/6228521\/\" target=\"blank\">Seed localization in ultrasound and registration to C-arm fluoroscopy using matched needle tracks for prostate brachytherapy<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">IEEE transactions on biomedical engineering, <\/span><span class=\"tp_pub_additional_volume\">vol. 59, <\/span><span class=\"tp_pub_additional_issue\">iss. 9, <\/span><span class=\"tp_pub_additional_pages\">pp. 2558-2567, <\/span><span class=\"tp_pub_additional_year\">2012<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_791\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('791','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_791\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('791','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_791\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('791','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_791\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2012l,<br \/>\r\ntitle = {Seed localization in ultrasound and registration to C-arm fluoroscopy using matched needle tracks for prostate brachytherapy},<br \/>\r\nauthor = {Mehdi Moradi and S Sara Mahdavi and Ehsan Dehghan and Julio R Lobo and Sanchit Deshmukh and William James Morris and Gabor Fichtinger and Septimiu E Salcudean},<br \/>\r\nurl = {https:\/\/ieeexplore.ieee.org\/abstract\/document\/6228521\/},<br \/>\r\nyear  = {2012},<br \/>\r\ndate = {2012-01-01},<br \/>\r\njournal = {IEEE transactions on biomedical engineering},<br \/>\r\nvolume = {59},<br \/>\r\nissue = {9},<br \/>\r\npages = {2558-2567},<br \/>\r\npublisher = {IEEE},<br \/>\r\nabstract = {We propose a novel fiducial-free approach for the registration of C-arm fluoroscopy to 3-D ultrasound images of prostate brachytherapy implants to enable dosimetry. The approach involves the reliable detection of a subset of radioactive seeds from 3-D ultrasound, and the use of needle tracks in both ultrasound and fluoroscopy for registration. Seed detection in ultrasound is achieved through template matching in 3-D radio frequency ultrasound signals, followed by thresholding and spatial filtering. The resulting subset of seeds is registered to the complete reconstruction of the brachytherapy implant from multiple C-arm fluoroscopy views. To compensate for the deformation caused by the ultrasound probe, simulated warping is applied to the seed cloud from fluoroscopy. The magnitude of the applied warping is optimized within the registration process. The registration is performed in two stages. First, the needle track \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('791','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_791\" style=\"display:none;\"><div class=\"tp_abstract_entry\">We propose a novel fiducial-free approach for the registration of C-arm fluoroscopy to 3-D ultrasound images of prostate brachytherapy implants to enable dosimetry. The approach involves the reliable detection of a subset of radioactive seeds from 3-D ultrasound, and the use of needle tracks in both ultrasound and fluoroscopy for registration. Seed detection in ultrasound is achieved through template matching in 3-D radio frequency ultrasound signals, followed by thresholding and spatial filtering. The resulting subset of seeds is registered to the complete reconstruction of the brachytherapy implant from multiple C-arm fluoroscopy views. To compensate for the deformation caused by the ultrasound probe, simulated warping is applied to the seed cloud from fluoroscopy. The magnitude of the applied warping is optimized within the registration process. The registration is performed in two stages. First, the needle track \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('791','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_791\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/6228521\/\" title=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/6228521\/\" target=\"_blank\">https:\/\/ieeexplore.ieee.org\/abstract\/document\/6228521\/<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('791','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Lee, Junghoon;  Fallavollita, Pascal;  Kuo, Nathanael;  Degeut, Anton;  Le, Yi;  Burdette, E. Clif;  Song, Danny Y;  Prince, Jerry L.;  Fichtinger, Gabor<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/dx.doi.org\/http:\/\/dx.doi.org\/10.1016\/j.media.2012.06.001\" title=\"Ultrasound\u2013fluoroscopy registration for prostate brachytherapy dosimetry\" target=\"blank\">Ultrasound\u2013fluoroscopy registration for prostate brachytherapy dosimetry<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Medical Image Analysis, <\/span><span class=\"tp_pub_additional_volume\">vol. 16, <\/span><span class=\"tp_pub_additional_pages\">pp. 1347-1358, <\/span><span class=\"tp_pub_additional_year\">2012<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_297\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('297','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_297\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('297','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_297\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{Dehghan2012a,<br \/>\r\ntitle = {Ultrasound\u2013fluoroscopy registration for prostate brachytherapy dosimetry},<br \/>\r\nauthor = {Ehsan Dehghan and Junghoon Lee and Pascal Fallavollita and Nathanael Kuo and Anton Degeut and Yi Le and E. Clif Burdette and Danny Y Song and Jerry L. Prince and Gabor Fichtinger},<br \/>\r\nurl = {http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841512000813<br \/>\r\nhttps:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_etal_US_Fluoro_Reg.pdf},<br \/>\r\ndoi = {http:\/\/dx.doi.org\/10.1016\/j.media.2012.06.001},<br \/>\r\nyear  = {2012},<br \/>\r\ndate = {2012-01-01},<br \/>\r\nurldate = {2012-01-01},<br \/>\r\njournal = {Medical Image Analysis},<br \/>\r\nvolume = {16},<br \/>\r\npages = {1347-1358},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('297','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_297\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841512000813\" title=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841512000813\" target=\"_blank\">http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841512000813<\/a><\/li><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_etal_US_Fluoro_Reg.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_et[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_et[...]<\/a><\/li><li><i class=\"ai ai-doi\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/dx.doi.org\/http:\/\/dx.doi.org\/10.1016\/j.media.2012.06.001\" title=\"Follow DOI:http:\/\/dx.doi.org\/10.1016\/j.media.2012.06.001\" target=\"_blank\">doi:http:\/\/dx.doi.org\/10.1016\/j.media.2012.06.001<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('297','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Moradi, Mehdi;  Wen, Xu;  French, Danny;  Lobo, Julio R.;  Morris, William J.;  Salcudean, Septimiu E.;  Fichtinger, Gabor<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_etal_MedPhys2011.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_etal_MedPhys2011.pdf\" target=\"blank\">Prostate implant reconstruction from C-arm images with motion-compensated tomosynthesis<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Medical Physics, <\/span><span class=\"tp_pub_additional_volume\">vol. 38, <\/span><span class=\"tp_pub_additional_number\">no. 10, <\/span><span class=\"tp_pub_additional_pages\">pp. 5290 \u2013 5302, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_325\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('325','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_325\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('325','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_325\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{Dehghan2011c,<br \/>\r\ntitle = {Prostate implant reconstruction from C-arm images with motion-compensated tomosynthesis},<br \/>\r\nauthor = {Ehsan Dehghan and Mehdi Moradi and Xu Wen and Danny French and Julio R. Lobo and William J. Morris and Septimiu E. Salcudean and Gabor Fichtinger},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_etal_MedPhys2011.pdf},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-10-01},<br \/>\r\nurldate = {2011-10-01},<br \/>\r\njournal = {Medical Physics},<br \/>\r\nvolume = {38},<br \/>\r\nnumber = {10},<br \/>\r\npages = {5290 \u2013 5302},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('325','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_325\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_etal_MedPhys2011.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_et[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_et[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('325','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Jain, Ameet K.;  Moradi, Mehdi;  Wen, Xu;  Morris, William J.;  Salcudean, Septimiu E.;  Fichtinger, Gabor<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/dx.doi.org\/10.1016\/j.media.2011.05.017\" title=\"Brachytherapy Seed Reconstruction with Joint-Encoded C-Arm Single-Axis Rotation and Motion Compensation\" target=\"blank\">Brachytherapy Seed Reconstruction with Joint-Encoded C-Arm Single-Axis Rotation and Motion Compensation<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Medical Image Analysis, <\/span><span class=\"tp_pub_additional_volume\">vol. 15, <\/span><span class=\"tp_pub_additional_pages\">pp. 760 \u2013 771, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_308\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('308','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_308\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('308','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_308\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{Dehghan2011a,<br \/>\r\ntitle = {Brachytherapy Seed Reconstruction with Joint-Encoded C-Arm Single-Axis Rotation and Motion Compensation},<br \/>\r\nauthor = {Ehsan Dehghan and Ameet K. Jain and Mehdi Moradi and Xu Wen and William J. Morris and Septimiu E. Salcudean and Gabor Fichtinger},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_etal_US_Fluoro_Reg.pdf},<br \/>\r\ndoi = {10.1016\/j.media.2011.05.017},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-10-01},<br \/>\r\nurldate = {2011-10-01},<br \/>\r\njournal = {Medical Image Analysis},<br \/>\r\nvolume = {15},<br \/>\r\npages = {760 \u2013 771},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('308','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_308\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_etal_US_Fluoro_Reg.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_et[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_et[...]<\/a><\/li><li><i class=\"ai ai-doi\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/dx.doi.org\/10.1016\/j.media.2011.05.017\" title=\"Follow DOI:10.1016\/j.media.2011.05.017\" target=\"_blank\">doi:10.1016\/j.media.2011.05.017<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('308','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_conference\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Moradi, Mehdi;  Mahdavi, S. S.;  Deshmukh, S.;  Lobo, Julio R.;  Dehghan, Ehsan;  Fichtinger, Gabor;  Morris, William J.;  Salcudean, Septimiu E.<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2011a.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2011a.pdf\" target=\"blank\">Towards intra-operative prostate brachytherapy dosimetry based on partial seed localization in ultrasound and registration to C-arm fluoroscopy<\/a> <span class=\"tp_pub_type tp_  conference\">Conference<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_booktitle\">Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011), <\/span><span class=\"tp_pub_additional_volume\">vol. 6891, <\/span><span class=\"tp_pub_additional_address\">Toronto, ON, Canada, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_336\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('336','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_336\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('336','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_336\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@conference{Moradi2011a,<br \/>\r\ntitle = {Towards intra-operative prostate brachytherapy dosimetry based on partial seed localization in ultrasound and registration to C-arm fluoroscopy},<br \/>\r\nauthor = {Mehdi Moradi and S. S. Mahdavi and S. Deshmukh and Julio R. Lobo and Ehsan Dehghan and Gabor Fichtinger and William J. Morris and Septimiu E. Salcudean},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2011a.pdf},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-09-01},<br \/>\r\nurldate = {2011-09-01},<br \/>\r\nbooktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011)},<br \/>\r\nvolume = {6891},<br \/>\r\npages = {291-298},<br \/>\r\naddress = {Toronto, ON, Canada},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {conference}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('336','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_336\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2011a.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2011[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Moradi2011[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('336','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_conference\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Lobo, Julio R.;  Moradi, Mehdi;  Chng, N.;  Dehghan, Ehsan;  Morris, William J.;  Fichtinger, Gabor;  Salcudean, Septimiu E.<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Lobo2011a.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Lobo2011a.pdf\" target=\"blank\">Quantifying stranded implant displacement following prostate brachytherapy<\/a> <span class=\"tp_pub_type tp_  conference\">Conference<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_booktitle\">Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011), <\/span><span class=\"tp_pub_additional_volume\">vol. 6891, <\/span><span class=\"tp_pub_additional_address\">Toronto, ON, Canada, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_326\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('326','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_326\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('326','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_326\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@conference{Lobo2011a,<br \/>\r\ntitle = {Quantifying stranded implant displacement following prostate brachytherapy},<br \/>\r\nauthor = {Julio R. Lobo and Mehdi Moradi and N. Chng and Ehsan Dehghan and William J. Morris and Gabor Fichtinger and Septimiu E. Salcudean},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Lobo2011a.pdf},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-09-01},<br \/>\r\nurldate = {2011-09-01},<br \/>\r\nbooktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011)},<br \/>\r\nvolume = {6891},<br \/>\r\npages = {307-314},<br \/>\r\naddress = {Toronto, ON, Canada},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {conference}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('326','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_326\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Lobo2011a.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Lobo2011a.[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Lobo2011a.[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('326','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_conference\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Lee, Junghoon;  Fallavollita, Pascal;  Kuo, Nathanael;  Degeut, Anton;  Burdette, E. Clif;  Song, Danny Y;  Prince, Jerry L.;  Fichtinger, Gabor<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_MICCAI11.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_MICCAI11.pdf\" target=\"blank\">Point-to-Volume Registration of Prostate Implants to Ultrasound<\/a> <span class=\"tp_pub_type tp_  conference\">Conference<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_booktitle\">Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011), <\/span><span class=\"tp_pub_additional_address\">Toronto, ON, Canada, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_323\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('323','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_323\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('323','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_323\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@conference{Dehghan2011b,<br \/>\r\ntitle = {Point-to-Volume Registration of Prostate Implants to Ultrasound},<br \/>\r\nauthor = {Ehsan Dehghan and Junghoon Lee and Pascal Fallavollita and Nathanael Kuo and Anton Degeut and E. Clif Burdette and Danny Y Song and Jerry L. Prince and Gabor Fichtinger},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_MICCAI11.pdf},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-09-01},<br \/>\r\nurldate = {2011-09-01},<br \/>\r\nbooktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011)},<br \/>\r\npages = {615 - 622},<br \/>\r\naddress = {Toronto, ON, Canada},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {conference}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('323','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_323\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_MICCAI11.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_MI[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan_MI[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('323','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Jain, Ameet K;  Moradi, Mehdi;  Wen, Xu;  Morris, W James;  Salcudean, Septimiu E;  Fichtinger, Gabor<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841511000855\" title=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841511000855\" target=\"blank\">Brachytherapy seed reconstruction with joint-encoded C-arm single-axis rotation and motion compensation<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Medical image analysis, <\/span><span class=\"tp_pub_additional_volume\">vol. 15, <\/span><span class=\"tp_pub_additional_issue\">iss. 5, <\/span><span class=\"tp_pub_additional_pages\">pp. 760-771, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_808\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('808','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_808\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('808','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_808\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('808','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_808\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2011j,<br \/>\r\ntitle = {Brachytherapy seed reconstruction with joint-encoded C-arm single-axis rotation and motion compensation},<br \/>\r\nauthor = {Ehsan Dehghan and Ameet K Jain and Mehdi Moradi and Xu Wen and W James Morris and Septimiu E Salcudean and Gabor Fichtinger},<br \/>\r\nurl = {https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841511000855},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-01-01},<br \/>\r\njournal = {Medical image analysis},<br \/>\r\nvolume = {15},<br \/>\r\nissue = {5},<br \/>\r\npages = {760-771},<br \/>\r\npublisher = {Elsevier},<br \/>\r\nabstract = {C-arm fluoroscopy images are frequently used for qualitative assessment of prostate brachytherapy. Three-dimensional seed reconstruction from C-arm images is necessary for intraoperative dosimetry and quantitative assessment. Seed reconstruction requires accurately known C-arm poses. We propose to measure the C-arm rotation angles and computationally compensate for inevitable C-arm motion to compute the pose. We compensate the translational motions of a C-arm, such as oscillation, sagging and wheel motion using a three-level optimization algorithm and obviate the need for full pose tracking using external trackers or fiducials. We validated our approach on simulated and 100 clinical data sets from 10 patients and gained on average, a seed matching rate of 98.5%, projection error of 0.33mm (STD=0.21mm) and computation time of 19.8s per patient, which must be considered as clinically excellent \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('808','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_808\" style=\"display:none;\"><div class=\"tp_abstract_entry\">C-arm fluoroscopy images are frequently used for qualitative assessment of prostate brachytherapy. Three-dimensional seed reconstruction from C-arm images is necessary for intraoperative dosimetry and quantitative assessment. Seed reconstruction requires accurately known C-arm poses. We propose to measure the C-arm rotation angles and computationally compensate for inevitable C-arm motion to compute the pose. We compensate the translational motions of a C-arm, such as oscillation, sagging and wheel motion using a three-level optimization algorithm and obviate the need for full pose tracking using external trackers or fiducials. We validated our approach on simulated and 100 clinical data sets from 10 patients and gained on average, a seed matching rate of 98.5%, projection error of 0.33mm (STD=0.21mm) and computation time of 19.8s per patient, which must be considered as clinically excellent \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('808','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_808\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841511000855\" title=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841511000855\" target=\"_blank\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1361841511000855<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('808','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Lobo, Julio R;  Moradi, Mehdi;  Chng, Nick;  Dehghan, Ehsan;  Morris, William J;  Fichtinger, Gabor;  Salcudean, Septimiu E<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/6095633\/\" title=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/6095633\/\" target=\"blank\">Use of needle track detection to quantify the displacement of stranded seeds following prostate brachytherapy<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">IEEE Transactions on Medical Imaging, <\/span><span class=\"tp_pub_additional_volume\">vol. 31, <\/span><span class=\"tp_pub_additional_issue\">iss. 3, <\/span><span class=\"tp_pub_additional_pages\">pp. 738-748, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_817\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('817','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_817\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('817','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_817\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('817','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_817\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2011l,<br \/>\r\ntitle = {Use of needle track detection to quantify the displacement of stranded seeds following prostate brachytherapy},<br \/>\r\nauthor = {Julio R Lobo and Mehdi Moradi and Nick Chng and Ehsan Dehghan and William J Morris and Gabor Fichtinger and Septimiu E Salcudean},<br \/>\r\nurl = {https:\/\/ieeexplore.ieee.org\/abstract\/document\/6095633\/},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-01-01},<br \/>\r\njournal = {IEEE Transactions on Medical Imaging},<br \/>\r\nvolume = {31},<br \/>\r\nissue = {3},<br \/>\r\npages = {738-748},<br \/>\r\npublisher = {IEEE},<br \/>\r\nabstract = {We aim to compute the movement of permanent stranded implant brachytherapy radioactive sources (seeds) in the prostate from the planned seed distribution to the intraoperative fluoroscopic distribution, and then to the postimplant computed tomography (CT) distribution. We present a novel approach to matching the seeds in these distributions to the plan by grouping the seeds into needle tracks. First, we identify the implantation axis using a sample consensus algorithm. Then, we use a network flow algorithm to group seeds into their needle tracks. Finally, we match the needles from the three stages using both their transverse plane location and the number of seeds per needle. We validated our approach on eight clinical prostate brachytherapy cases, having a total of 871 brachytherapy seeds distributed in 193 needles. For the intraoperative and postimplant data, 99.31% and 99.41% of the seeds were correctly \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('817','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_817\" style=\"display:none;\"><div class=\"tp_abstract_entry\">We aim to compute the movement of permanent stranded implant brachytherapy radioactive sources (seeds) in the prostate from the planned seed distribution to the intraoperative fluoroscopic distribution, and then to the postimplant computed tomography (CT) distribution. We present a novel approach to matching the seeds in these distributions to the plan by grouping the seeds into needle tracks. First, we identify the implantation axis using a sample consensus algorithm. Then, we use a network flow algorithm to group seeds into their needle tracks. Finally, we match the needles from the three stages using both their transverse plane location and the number of seeds per needle. We validated our approach on eight clinical prostate brachytherapy cases, having a total of 871 brachytherapy seeds distributed in 193 needles. For the intraoperative and postimplant data, 99.31% and 99.41% of the seeds were correctly \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('817','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_817\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/6095633\/\" title=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/6095633\/\" target=\"_blank\">https:\/\/ieeexplore.ieee.org\/abstract\/document\/6095633\/<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('817','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Moradi, Mehdi;  Wen, Xu;  French, Danny;  Lobo, Julio;  Morris, W James;  Salcudean, Septimiu E;  Fichtinger, Gabor<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.3633897\" title=\"https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.3633897\" target=\"blank\">Prostate implant reconstruction from C\u2010arm images with motion\u2010compensated tomosynthesis<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Medical Physics, <\/span><span class=\"tp_pub_additional_volume\">vol. 38, <\/span><span class=\"tp_pub_additional_issue\">iss. 10, <\/span><span class=\"tp_pub_additional_pages\">pp. 5290-5302, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_862\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('862','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_862\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('862','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_862\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('862','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_862\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2011t,<br \/>\r\ntitle = {Prostate implant reconstruction from C\u2010arm images with motion\u2010compensated tomosynthesis},<br \/>\r\nauthor = {Ehsan Dehghan and Mehdi Moradi and Xu Wen and Danny French and Julio Lobo and W James Morris and Septimiu E Salcudean and Gabor Fichtinger},<br \/>\r\nurl = {https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.3633897},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-01-01},<br \/>\r\njournal = {Medical Physics},<br \/>\r\nvolume = {38},<br \/>\r\nissue = {10},<br \/>\r\npages = {5290-5302},<br \/>\r\npublisher = {American Association of Physicists in Medicine},<br \/>\r\nabstract = {Purpose <br \/>\r\nAccurate localization of prostate implants from several C\u2010arm images is necessary for ultrasound\u2010fluoroscopy fusion and intraoperative dosimetry. The authors propose a computational motion compensation method for tomosynthesis\u2010based reconstruction that enables 3D localization of prostate implants from C\u2010arm images despite C\u2010arm oscillation and sagging. <br \/>\r\nMethods <br \/>\r\nFive C\u2010arm images are captured by rotating the C\u2010arm around its primary axis, while measuring its rotation angle using a protractor or the C\u2010arm joint encoder. The C\u2010arm images are processed to obtain binary seed\u2010only images from which a volume of interest is reconstructed. The motion compensation algorithm, iteratively, compensates for 2D translational motion of the C\u2010arm by maximizing the number of voxels that project on a seed projection in all of the images. This obviates the need for C\u2010arm full pose tracking traditionally \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('862','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_862\" style=\"display:none;\"><div class=\"tp_abstract_entry\">Purpose <br \/>\r\nAccurate localization of prostate implants from several C\u2010arm images is necessary for ultrasound\u2010fluoroscopy fusion and intraoperative dosimetry. The authors propose a computational motion compensation method for tomosynthesis\u2010based reconstruction that enables 3D localization of prostate implants from C\u2010arm images despite C\u2010arm oscillation and sagging. <br \/>\r\nMethods <br \/>\r\nFive C\u2010arm images are captured by rotating the C\u2010arm around its primary axis, while measuring its rotation angle using a protractor or the C\u2010arm joint encoder. The C\u2010arm images are processed to obtain binary seed\u2010only images from which a volume of interest is reconstructed. The motion compensation algorithm, iteratively, compensates for 2D translational motion of the C\u2010arm by maximizing the number of voxels that project on a seed projection in all of the images. This obviates the need for C\u2010arm full pose tracking traditionally \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('862','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_862\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.3633897\" title=\"https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.3633897\" target=\"_blank\">https:\/\/aapm.onlinelibrary.wiley.com\/doi\/abs\/10.1118\/1.3633897<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('862','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Lee, Junghoon;  Fallavollita, Pascal;  Kuo, Nathanael;  Deguet, Anton;  Burdette, E Clif;  Song, Danny;  Prince, Jerry L;  Fichtinger, Gabor<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-23629-7_75\" title=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-23629-7_75\" target=\"blank\">Point-to-volume registration of prostate implants to ultrasound<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_pages\">pp. 615-622, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_905\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('905','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_905\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('905','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_905\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('905','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_905\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2011v,<br \/>\r\ntitle = {Point-to-volume registration of prostate implants to ultrasound},<br \/>\r\nauthor = {Ehsan Dehghan and Junghoon Lee and Pascal Fallavollita and Nathanael Kuo and Anton Deguet and E Clif Burdette and Danny Song and Jerry L Prince and Gabor Fichtinger},<br \/>\r\nurl = {https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-23629-7_75},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-01-01},<br \/>\r\npages = {615-622},<br \/>\r\npublisher = {Springer Berlin Heidelberg},<br \/>\r\nabstract = {Ultrasound-Fluoroscopy fusion is a key step toward intra-operative dosimetry for prostate brachytherapy. We propose a method for intensity-based registration of fluoroscopy to ultrasound that obviates the need for seed segmentation required for seed-based registration. We employ image thresholding and morphological and Gaussian filtering to enhance the image intensity distribution of ultrasound volume. Finally, we find the registration parameters by maximizing a point-to-volume similarity metric. We conducted an experiment on a ground truth phantom and achieved registration error of 0.7\u00b10.2mm. Our clinical results on 5 patient data sets show excellent visual agreement between the registered seeds and the ultrasound volume with a seed-to-seed registration error of 1.8\u00b10.9mm. With low registration error, high computational speed and no need for manual seed segmentation, our method is promising \u2026},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('905','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_905\" style=\"display:none;\"><div class=\"tp_abstract_entry\">Ultrasound-Fluoroscopy fusion is a key step toward intra-operative dosimetry for prostate brachytherapy. We propose a method for intensity-based registration of fluoroscopy to ultrasound that obviates the need for seed segmentation required for seed-based registration. We employ image thresholding and morphological and Gaussian filtering to enhance the image intensity distribution of ultrasound volume. Finally, we find the registration parameters by maximizing a point-to-volume similarity metric. We conducted an experiment on a ground truth phantom and achieved registration error of 0.7\u00b10.2mm. Our clinical results on 5 patient data sets show excellent visual agreement between the registered seeds and the ultrasound volume with a seed-to-seed registration error of 1.8\u00b10.9mm. With low registration error, high computational speed and no need for manual seed segmentation, our method is promising \u2026<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('905','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_905\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-23629-7_75\" title=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-23629-7_75\" target=\"_blank\">https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-23629-7_75<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('905','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Reiser, I;  Lee, S;  Nishikawa, RM;  Zaidi, Habib;  Guerra, Alberto Del;  Richter, Anne;  Wilbert, J\u00fcrgen;  Flentje, Michael;  Dehghan, Ehsan;  Moradi, Mehdi;  Wen, Xu;  French, Danny;  Lobo, Julio;  Morris, W James;  Salcudean, Septimiu E;  Fichtinger, Gabor;  Enger, Shirin A;  D\u2019Amours, Michel;  Beaulieu, Luc<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/scholar.google.com\/scholar?cluster=15463453914223911761&amp;hl=en&amp;oi=scholarr\" title=\"https:\/\/scholar.google.com\/scholar?cluster=15463453914223911761&amp;hl=en&amp;oi=scholarr\" target=\"blank\">POINT\/COUNTERPOINT<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_journal\">Medical Physics, <\/span><span class=\"tp_pub_additional_volume\">vol. 38, <\/span><span class=\"tp_pub_additional_issue\">iss. 10, <\/span><span class=\"tp_pub_additional_year\">2011<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_1061\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('1061','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_1061\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('1061','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_1061\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('1061','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_1061\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2011y,<br \/>\r\ntitle = {POINT\/COUNTERPOINT},<br \/>\r\nauthor = {I Reiser and S Lee and RM Nishikawa and Habib Zaidi and Alberto Del Guerra and Anne Richter and J\u00fcrgen Wilbert and Michael Flentje and Ehsan Dehghan and Mehdi Moradi and Xu Wen and Danny French and Julio Lobo and W James Morris and Septimiu E Salcudean and Gabor Fichtinger and Shirin A Enger and Michel D\u2019Amours and Luc Beaulieu},<br \/>\r\nurl = {https:\/\/scholar.google.com\/scholar?cluster=15463453914223911761&hl=en&oi=scholarr},<br \/>\r\nyear  = {2011},<br \/>\r\ndate = {2011-01-01},<br \/>\r\njournal = {Medical Physics},<br \/>\r\nvolume = {38},<br \/>\r\nissue = {10},<br \/>\r\nabstract = {Medical Physics (ISSN: 0094-2405) is published monthly by the AAPM through the American Institute of Physics. 2011 subscription rates are: US $1197. POSTMASTER: Send address changes to MedicalPhysics, AIP, Suite 1NO1, 2 Huntington Quadrangle, Melville, NY 11747-4502. Periodicals postage paid at Huntington Station, NY and additional mailing offices. Membership in the American Association of Physicists in Medicine includes $40.00 from member ship dues to be applied towards a subscription to Medical Physics.},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('1061','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_1061\" style=\"display:none;\"><div class=\"tp_abstract_entry\">Medical Physics (ISSN: 0094-2405) is published monthly by the AAPM through the American Institute of Physics. 2011 subscription rates are: US $1197. POSTMASTER: Send address changes to MedicalPhysics, AIP, Suite 1NO1, 2 Huntington Quadrangle, Melville, NY 11747-4502. Periodicals postage paid at Huntington Station, NY and additional mailing offices. Membership in the American Association of Physicists in Medicine includes $40.00 from member ship dues to be applied towards a subscription to Medical Physics.<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('1061','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_1061\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/scholar.google.com\/scholar?cluster=15463453914223911761&amp;hl=en&amp;oi=scholarr\" title=\"https:\/\/scholar.google.com\/scholar?cluster=15463453914223911761&amp;hl=en&amp;oi[...]\" target=\"_blank\">https:\/\/scholar.google.com\/scholar?cluster=15463453914223911761&amp;hl=en&amp;oi[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('1061','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_conference\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Lee, Junghoon;  Moradi, Mehdi;  Wen, Xu;  Fichtinger, Gabor;  Salcudean, Septimiu E.<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/dx.doi.org\/http:\/\/dx.doi.org\/10.1007\/978-3-642-15705-9_35\" title=\"Prostate Brachytherapy Seed Reconstruction using C-Arm Rotation Measurement and Motion Compensation\" target=\"blank\">Prostate Brachytherapy Seed Reconstruction using C-Arm Rotation Measurement and Motion Compensation<\/a> <span class=\"tp_pub_type tp_  conference\">Conference<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_booktitle\">Medical Image Computing and Computer-Assisted Intervention (MICCAI) 2010, <\/span><span class=\"tp_pub_additional_organization\">Springer <\/span><span class=\"tp_pub_additional_publisher\">Springer, <\/span><span class=\"tp_pub_additional_address\">Beijing, China, <\/span><span class=\"tp_pub_additional_year\">2010<\/span>, <span class=\"tp_pub_additional_isbn\">ISBN: 978-3-642-15704-2<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_359\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('359','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_359\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('359','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_359\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@conference{Dehghan2010a,<br \/>\r\ntitle = {Prostate Brachytherapy Seed Reconstruction using C-Arm Rotation Measurement and Motion Compensation},<br \/>\r\nauthor = {Ehsan Dehghan and Junghoon Lee and Mehdi Moradi and Xu Wen and Gabor Fichtinger and Septimiu E. Salcudean},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan2010a.pdf},<br \/>\r\ndoi = {http:\/\/dx.doi.org\/10.1007\/978-3-642-15705-9_35},<br \/>\r\nisbn = {978-3-642-15704-2},<br \/>\r\nyear  = {2010},<br \/>\r\ndate = {2010-01-01},<br \/>\r\nurldate = {2010-01-01},<br \/>\r\nbooktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI) 2010},<br \/>\r\npages = {283-290},<br \/>\r\npublisher = {Springer},<br \/>\r\naddress = {Beijing, China},<br \/>\r\norganization = {Springer},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {conference}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('359','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_359\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan2010a.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan201[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Dehghan201[...]<\/a><\/li><li><i class=\"ai ai-doi\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/dx.doi.org\/http:\/\/dx.doi.org\/10.1007\/978-3-642-15705-9_35\" title=\"Follow DOI:http:\/\/dx.doi.org\/10.1007\/978-3-642-15705-9_35\" target=\"_blank\">doi:http:\/\/dx.doi.org\/10.1007\/978-3-642-15705-9_35<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('359','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_conference\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Gordon, Lauren;  Dehghan, Ehsan;  Salcudean, Septimiu E.;  Fichtinger, Gabor<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Gordon2010a.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Gordon2010a.pdf\" target=\"blank\">Reconstruction of Needle Tracts from Fluoroscopy in Prostate Brachytherapy<\/a> <span class=\"tp_pub_type tp_  conference\">Conference<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_booktitle\">22nd International Conference of the Society for Medical Innovation and Technology (SMIT), <\/span><span class=\"tp_pub_additional_address\">Trondheim, Norway, September 2-4, 2010, <\/span><span class=\"tp_pub_additional_year\">2010<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_resource_link\"><a id=\"tp_links_sh_360\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('360','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_360\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('360','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_360\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@conference{Gordon2010a,<br \/>\r\ntitle = {Reconstruction of Needle Tracts from Fluoroscopy in Prostate Brachytherapy},<br \/>\r\nauthor = {Lauren Gordon and Ehsan Dehghan and Septimiu E. Salcudean and Gabor Fichtinger},<br \/>\r\nurl = {https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Gordon2010a.pdf},<br \/>\r\nyear  = {2010},<br \/>\r\ndate = {2010-01-01},<br \/>\r\nurldate = {2010-01-01},<br \/>\r\nbooktitle = {22nd International Conference of the Society for Medical Innovation and Technology (SMIT)},<br \/>\r\naddress = {Trondheim, Norway, September 2-4, 2010},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {conference}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('360','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_360\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-file-pdf\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Gordon2010a.pdf\" title=\"https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Gordon2010[...]\" target=\"_blank\">https:\/\/labs.cs.queensu.ca\/perklab\/wp-content\/uploads\/sites\/3\/2024\/02\/Gordon2010[...]<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('360','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><div class=\"tp_publication tp_publication_article\"><div class=\"tp_pub_info\"><p class=\"tp_pub_author\"> Dehghan, Ehsan;  Lee, Junghoon;  Moradi, Mehdi;  Wen, Xu;  Fichtinger, Gabor;  Salcudean, Septimiu E<\/p><p class=\"tp_pub_title\"><a class=\"tp_title_link\" href=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-15705-9_35\" title=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-15705-9_35\" target=\"blank\">Prostate brachytherapy seed reconstruction using C-arm rotation measurement and motion compensation<\/a> <span class=\"tp_pub_type tp_  article\">Journal Article<\/span> <\/p><p class=\"tp_pub_additional\"><span class=\"tp_pub_additional_in\">In: <\/span><span class=\"tp_pub_additional_pages\">pp. 283-290, <\/span><span class=\"tp_pub_additional_year\">2010<\/span>.<\/p><p class=\"tp_pub_menu\"><span class=\"tp_abstract_link\"><a id=\"tp_abstract_sh_852\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('852','tp_abstract')\" title=\"Show abstract\" style=\"cursor:pointer;\">Abstract<\/a><\/span> | <span class=\"tp_resource_link\"><a id=\"tp_links_sh_852\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('852','tp_links')\" title=\"Show links and resources\" style=\"cursor:pointer;\">Links<\/a><\/span> | <span class=\"tp_bibtex_link\"><a id=\"tp_bibtex_sh_852\" class=\"tp_show\" onclick=\"teachpress_pub_showhide('852','tp_bibtex')\" title=\"Show BibTeX entry\" style=\"cursor:pointer;\">BibTeX<\/a><\/span><\/p><div class=\"tp_bibtex\" id=\"tp_bibtex_852\" style=\"display:none;\"><div class=\"tp_bibtex_entry\"><pre>@article{fichtinger2010t,<br \/>\r\ntitle = {Prostate brachytherapy seed reconstruction using C-arm rotation measurement and motion compensation},<br \/>\r\nauthor = {Ehsan Dehghan and Junghoon Lee and Mehdi Moradi and Xu Wen and Gabor Fichtinger and Septimiu E Salcudean},<br \/>\r\nurl = {https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-15705-9_35},<br \/>\r\nyear  = {2010},<br \/>\r\ndate = {2010-01-01},<br \/>\r\npages = {283-290},<br \/>\r\npublisher = {Springer Berlin Heidelberg},<br \/>\r\nabstract = {During prostate brachytherapy, C-arm flouroscopy images are used for a qualitative assessment of the procedure. Three dimensional reconstruction of the implanted seeds can be used for intraoperative dosimetry and quantitative assessment. Accurate C-arm pose estimation is necessary for 3D localization of the seeds. We propose to measure the C-arm rotation angles and computationally compensate the inevitable C-arm translational motion to estimate the pose. We compensate the oscillation, sagging and wheel motion of the C-arm using a three-level optimization algorithm, without which the reconstruction can fail. We validated our approach on simulated and 10 data sets from 5 patients and gained on average 99.1% success rate, 0.33 mm projection error and computation time of less than one minute per patient, which are clinically excellent results.},<br \/>\r\nkeywords = {},<br \/>\r\npubstate = {published},<br \/>\r\ntppubtype = {article}<br \/>\r\n}<br \/>\r\n<\/pre><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('852','tp_bibtex')\">Close<\/a><\/p><\/div><div class=\"tp_abstract\" id=\"tp_abstract_852\" style=\"display:none;\"><div class=\"tp_abstract_entry\">During prostate brachytherapy, C-arm flouroscopy images are used for a qualitative assessment of the procedure. Three dimensional reconstruction of the implanted seeds can be used for intraoperative dosimetry and quantitative assessment. Accurate C-arm pose estimation is necessary for 3D localization of the seeds. We propose to measure the C-arm rotation angles and computationally compensate the inevitable C-arm translational motion to estimate the pose. We compensate the oscillation, sagging and wheel motion of the C-arm using a three-level optimization algorithm, without which the reconstruction can fail. We validated our approach on simulated and 10 data sets from 5 patients and gained on average 99.1% success rate, 0.33 mm projection error and computation time of less than one minute per patient, which are clinically excellent results.<\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('852','tp_abstract')\">Close<\/a><\/p><\/div><div class=\"tp_links\" id=\"tp_links_852\" style=\"display:none;\"><div class=\"tp_links_entry\"><ul class=\"tp_pub_list\"><li><i class=\"fas fa-globe\"><\/i><a class=\"tp_pub_list\" href=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-15705-9_35\" title=\"https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-15705-9_35\" target=\"_blank\">https:\/\/link.springer.com\/chapter\/10.1007\/978-3-642-15705-9_35<\/a><\/li><\/ul><\/div><p class=\"tp_close_menu\"><a class=\"tp_close\" onclick=\"teachpress_pub_showhide('852','tp_links')\">Close<\/a><\/p><\/div><\/div><\/div><\/div><\/div><\/div>\n","protected":false},"featured_media":1598,"template":"","meta":{"_acf_changed":false,"_uag_custom_page_level_css":"","site-sidebar-layout":"default","site-content-layout":"","ast-site-content-layout":"default","site-content-style":"default","site-sidebar-style":"default","ast-global-header-display":"","ast-banner-title-visibility":"","ast-main-header-display":"","ast-hfb-above-header-display":"","ast-hfb-below-header-display":"","ast-hfb-mobile-header-display":"","site-post-title":"","ast-breadcrumbs-content":"","ast-featured-img":"","footer-sml-layout":"","ast-disable-related-posts":"","theme-transparent-header-meta":"","adv-header-id-meta":"","stick-header-meta":"","header-above-stick-meta":"","header-main-stick-meta":"","header-below-stick-meta":"","astra-migrate-meta-layouts":"default","ast-page-background-enabled":"default","ast-page-background-meta":{"desktop":{"background-color":"var(--ast-global-color-4)","background-image":"","background-repeat":"repeat","background-position":"center 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Martin","author_link":"https:\/\/labs.cs.queensu.ca\/perklab\/author\/"},"uagb_comment_info":0,"uagb_excerpt":"Ehasn Dehghan Postdoctoral Fellow School of Computing Queen&#8217;s University Member from 2010 to 2012 Dehghan, Ehsan; Le, Yi; Lee, Junghoon; Song, Danny Y; Fichtinger, Gabor; Prince, Jerry L.CT AND MRI FUSION FOR POSTIMPLANT PROSTATE BRACHYTHERAPY EVALUATION Conference IEEE Int. Symp on Biomedical Imaging, 2016.Abstract | Links | BibTeX@conference{Dehghan2016, title = {CT AND MRI FUSION FOR&hellip;","_links":{"self":[{"href":"https:\/\/labs.cs.queensu.ca\/perklab\/wp-json\/wp\/v2\/qsc_member\/2365","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/labs.cs.queensu.ca\/perklab\/wp-json\/wp\/v2\/qsc_member"}],"about":[{"href":"https:\/\/labs.cs.queensu.ca\/perklab\/wp-json\/wp\/v2\/types\/qsc_member"}],"version-history":[{"count":0,"href":"https:\/\/labs.cs.queensu.ca\/perklab\/wp-json\/wp\/v2\/qsc_member\/2365\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/labs.cs.queensu.ca\/perklab\/wp-json\/wp\/v2\/media\/1598"}],"wp:attachment":[{"href":"https:\/\/labs.cs.queensu.ca\/perklab\/wp-json\/wp\/v2\/media?parent=2365"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}