2024
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Medical image synthesis via conditional GANs: Application to segmenting brain tumours Journal Article
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Preoperative CT and survival data for patients undergoing resection of colorectal liver metastases Journal Article
In: Sci. Data, vol. 11, no. 1, pp. 172, 2024.
Machine Learning Detection and Characterization of Splenic Injuries on Abdominal Computed Tomography Journal Article
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2023
The Association between COVID-19 and Changes in Opioid Prescribing Patterns and Opioid-Related Overdoses: A Retrospective Cohort Study Journal Article
In: Can. J. Pain, vol. 7, no. 1, pp. 2176297, 2023.
Computerized Diagnosis of Liver Tumors From CT Scans Using a Deep Neural Network Approach Journal Article
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Author Correction: Federated learning enables big data for rare cancer boundary detection Journal Article
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2022
Federated learning enables big data for rare cancer boundary detection Journal Article
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Radiomics artificial intelligence modelling for prediction of local control for colorectal liver metastases treated with radiotherapy Journal Article
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A primer on texture analysis in abdominal radiology Journal Article
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Artificial intelligence and predictive algorithms in medicine: Promise and problems Journal Article
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Radiomic Analysis: Study Design, Statistical Analysis, and Other Bias Mitigation Strategies Journal Article
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ASO Visual Abstract: Recurrence After Resection of Pancreatic Cancer – Can Radiomics Predict Patients at Greatest Risk of Liver Metastasis? Journal Article
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Recurrence After Resection of Pancreatic Cancer: Can Radiomics Predict Patients at Greatest Risk of Liver Metastasis? Journal Article
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The Medical Segmentation Decathlon Journal Article
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Prediction of hospitalization and icu admission for ontario covid-19 patients with cardiac comorbidities Journal Article
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Developing a Cancer Digital Twin: Supervised Metastases Detection From Consecutive Structured Radiology Reports Journal Article
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Towards Optimal Patch Size in Vision Transformers for Tumor Segmentation Book Section
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2021
In: Radiology, vol. 301, no. 1, pp. 115-122, 2021.
Genetic Determinants of Outcome in Intrahepatic Cholangiocarcinoma Journal Article
In: Hepatology, vol. 74, no. 3, pp. 1429-1444, 2021.
PD-0735 Time-dependent machine learning survival prediction model of brain metastases with MRI radiomics Journal Article
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Quantitative Computed Tomography Image Analysis to Predict Pancreatic Neuroendocrine Tumor Grade Journal Article
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Preoperative CT predictors of survival in patients with pancreatic ductal adenocarcinoma undergoing curative intent surgery Journal Article
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Radiomics in surgical oncology: applications and challenges Journal Article
In: Comput. Assist. Surg., vol. 26, no. 1, pp. 85-96, 2021.
Interactive Machine Learning-Based Multi-Label Segmentation of Solid Tumors and Organs Journal Article
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Modality Completion via Gaussian Process Prior Variational Autoencoders for Multi-modal Glioma Segmentation Book Section
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Utility of High-Throughput Imaging Mass Cytometry for Cancer Research: A feasibility study Proceedings Article
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2020
Spatial mapping of the collagen distribution in human and mouse tissues by force volume atomic force microscopy Journal Article
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Convolutional neural network for the detection of pancreatic cancer on CT scans – Authors' reply Journal Article
In: Lancet Digit. Health, vol. 2, no. 9, pp. e454, 2020.
Extracellular Vesicle and Particle Biomarkers Define Multiple Human Cancers Journal Article
In: Cell, vol. 182, no. 4, pp. 1044-1061.e18, 2020.
Special Section Guest Editorial: Interventional and Surgical Data Science for Data-Driven Patient Outcomes Journal Article
In: J. Med. Imaging, vol. 7, no. 3, pp. 031501, 2020.
Accounting for intraoperative brain shift ascribable to cavity collapse during intracranial tumor resection Journal Article
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Multimodal radiomics and cyst fluid inflammatory markers model to predict preoperative risk in intraductal papillary mucinous neoplasms Journal Article
In: J. Med. Imaging, vol. 7, no. 3, pp. 031507, 2020.
Radiomic feature reproducibility in contrast-enhanced CT of the pancreas is affected by variabilities in scan parameters and manual segmentation Journal Article
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2019
Radiomics-based prediction of microsatellite instability in colorectal cancer at initial computed tomography evaluation Journal Article
In: Abdom. Radiol. Online, vol. 44, no. 11, 2019.
CT radiomics associations with genotype and stromal content in pancreatic ductal adenocarcinoma Journal Article
In: Abdom. Radiol., vol. 44, no. 9, pp. 3148-3157, 2019.
Distinct histomorphological features are associated with IDH1 mutation in intrahepatic cholangiocarcinoma Journal Article
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Abstract 2444: The use of CT radiomics to predict immune infiltrate in pancreatic ductal adenocarcinoma Journal Article
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Utility of Image Guidance in the Localization of Disappearing Colorectal Liver Metastases Journal Article
In: J. Gastrointest. Surg., vol. 23, no. 4, pp. 760-767, 2019.
Regional differences in gallbladder cancer pathogenesis: Insights from a multi-institutional comparison of tumor mutations Journal Article
In: Cancer, vol. 125, no. 4, pp. 575-585, 2019.
Preoperative risk prediction for intraductal papillary mucinous neoplasms by quantitative CT image analysis Journal Article
In: HPB, vol. 21, no. 2, pp. 212-218, 2019.
Quantitative imaging features of pretreatment CT predict volumetric response to chemotherapy in patients with colorectal liver metastases Journal Article
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Unsupervised Subtyping of Cholangiocarcinoma Using a Deep Clustering Convolutional Autoencoder Book Section
In: Image, Medical (Ed.): in Lecture Notes in Computer Science, pp. 604-612, Springer International Publishing, Cham, 2019.
2018
Short-term reproducibility of radiomic features in liver parenchyma and liver malignancies on contrast-enhanced CT imaging Journal Article
In: Abdom. Radiol., vol. 43, no. 12, pp. 3271-3278, 2018.
CT radiomics to predict high-risk intraductal papillary mucinous neoplasms of the pancreas Journal Article
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Fast and accurate vision-based stereo reconstruction and motion estimation for image-guided liver surgery Journal Article
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INTRAHEPATIC CHOLANGIOCARCINOMAS HAVE HISTOLOGICALLY AND IMMUNOPHENOTYPICALLY DISTINCT SMALL AND LARGE DUCT PATTERNS Journal Article
In: Am. J. Surg. Pathol., vol. 42, no. 10, pp. 1334-1345, 2018.
Intrahepatic cholangiocarcinoma: can imaging phenotypes predict survival and tumor genetics? Journal Article
In: Abdom. Radiol., vol. 43, no. 10, pp. 2665-2672, 2018.
Can physician gestalt predict survival in patients with resectable pancreatic adenocarcinoma? Journal Article
In: Abdom. Radiol., vol. 43, no. 8, pp. 2113-2118, 2018.
Quantitative Imaging Features and Postoperative Hepatic Insufficiency: A Multi-Institutional Expanded Cohort Journal Article
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In: J. Med. Imaging, vol. 5, no. 02, pp. 1, 2018.
Survival Prediction in Pancreatic Ductal Adenocarcinoma by Quantitative Computed Tomography Image Analysis Journal Article
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Patterns of recurrence and peri-operative predictors of liver metastasis after pancreatic cancer resection Journal Article
In: HPB, vol. 20, pp. S145, 2018.
In: HPB, vol. 20, no. 3, pp. 260-267, 2018.
Deep convolutional neural network for the classification of hepatocellular carcinoma and intrahepatic cholangiocarcinoma Journal Article
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Quantitative CT analysis for the preoperative prediction of pathologic grade in pancreatic neuroendocrine tumors Journal Article
In: Medical Imaging, vol. 2018: Computer-Aided Diagnosis, SPIE, pp. 381-386, 2018.
Use of Quantitative Image Analysis and Cyst Fluid Inflammatory Markers to Predict Risk in Intraductal Papillary Mucinous Neoplasms Journal Article
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Simulation, Image Processing, and Ultrasound Systems for Assisted Diagnosis and Navigation: International Workshops, POCUS 2018, BIVPCS 2018, CuRIOUS 2018, and CPM 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 16-20, 2018, Proceedings Journal Article
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CPM 2018 preface: International Workshop on Point-of-Care Ultrasound, POCUS 2018, the International Workshop on Bio-Imaging and Visualization for Patient-Customized Simulations, BIVPCS 2017, the International Workshop on Correction of Brainshift with Intra-Operative Ultrasound, CuRIOUS 2018, and the International Workshop on Computational Precision Medicine, CPM 2018, held in conjunction with the 21st International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2018 Journal Article
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Influence of CT acquisition and reconstruction parameters on radiomic feature reproducibility Journal Article
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2017
Characterization and correction of intraoperative soft tissue deformation in image-guided laparoscopic liver surgery Journal Article
In: J. Med. Imaging, vol. 5, no. 2, pp. 021203, 2017.
Preliminary study of tumor heterogeneity in imaging predicts two year survival in pancreatic cancer patients Journal Article
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Preoperative Prediction of Microvascular Invasion in Hepatocellular Carcinoma Using Quantitative Image Analysis Journal Article
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In: J. Am. Coll. Surg., vol. 225, no. 4, 2017, (Supplement 1, p. S137).
Deformation correction for image guided liver surgery: An intraoperative fidelity assessment Journal Article
In: Surgery, vol. 162, no. 3, pp. 537-547, 2017.
Computed Tomography Image Texture: A Noninvasive Prognostic Marker of Hepatic Recurrence After Hepatectomy for Metastatic Colorectal Cancer Journal Article
In: Ann. Surg. Oncol., vol. 24, no. 9, pp. 2482-2490, 2017.
Improving Registration Robustness for Image-Guided Liver Surgery in a Novel Human-to-Phantom Data Framework Journal Article
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Mutational profiling of resected intrahepatic cholangiocarcinoma Journal Article
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Behind the cyst: predicting grade of dysplasia in intraductal papillary mucinous neoplasms (IPMNs) by quantitative image analysis Journal Article
In: HPB, vol. 19, pp. S22, 2017.
Preoperative assessment of microvascular invasion in hepatocellular carcinoma Journal Article
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Quantification of CT images for the classification of high- and low-risk pancreatic cysts Journal Article
In: Medical Imaging, vol. 2017: Computer-Aided Diagnosis, SPIE, pp. 220-225, 2017.
Through the Looking-Mass: Preoperative Survival Prediction in Pancreatic Ductal Adenocarcinoma (PDAC) by Quantitative CT Analysis Journal Article
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2016
A novel method for texture-mapping conoscopic surfaces for minimally invasive image-guided kidney surgery Journal Article
In: Int. J. Comput. Assist. Radiol. Surg., vol. 11, no. 8, pp. 1515-1526, 2016.
Clinical evaluation of a model-updated image-guidance approach to brain shift compensation: experience in 16 cases Journal Article
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Current Evidence in Image-Guided Liver Surgery Journal Article
In: J. Gastrointest. Surg., vol. 20, no. 6, pp. 1265-1269, 2016.
Texture analysis for survival prediction of pancreatic ductal adenocarcinoma patients with neoadjuvant chemotherapy Journal Article
In: Medical Imaging, vol. 2016: Image Processing, SPIE, pp. 505-510, 2016.
Evaluation of model-based deformation correction in image-guided liver surgery via tracked intraoperative ultrasound Journal Article
In: J. Med. Imaging, vol. 3, no. 1, pp. 015003, 2016.
2015
Early trends in serum phosphate and creatinine levels are associated with mortality following major hepatectomy Journal Article
In: HPB, vol. 17, no. 12, pp. 1058-1065, 2015.
Assessing splenic enlargement on CT by unidimensional measurement changes in patients with colorectal liver metastases Journal Article
In: Abdom. Imaging, vol. 40, no. 7, pp. 2338-2344, 2015.
Cholangiocarcinoma: Correlation between Molecular Profiling and Imaging Phenotypes Journal Article
In: PLOS ONE, vol. 10, no. 7, pp. e0132953, 2015.
In: J. Am. Coll. Surg., vol. 220, no. 3, pp. 271-280, 2015.
Texture Analysis of Preoperative CT Images for Prediction of Postoperative Hepatic Insufficiency: A Preliminary Study Journal Article
In: J. Am. Coll. Surg., vol. 220, no. 3, pp. 339-346, 2015.
2014
Hepatic Resection Planning in the Modern Era: In reply to Mise and colleagues Journal Article
In: J. Am. Coll. Surg., vol. 219, no. 6, pp. 1195, 2014.
Remnant Growth Rate after Portal Vein Embolization Is a Good Early Predictor of Post-Hepatectomy Liver Failure Journal Article
In: J. Am. Coll. Surg., vol. 219, no. 4, pp. 620-630, 2014.
Computation and visualization of uncertainty in surgical navigation Journal Article
In: Int. J. Med. Robot., vol. 10, no. 3, pp. 332-343, 2014.
Liver Planning Software Accurately Predicts Postoperative Liver Volume and Measures Early Regeneration Journal Article
In: J. Am. Coll. Surg., vol. 219, no. 2, pp. 199-207, 2014.
Evaluation of Conoscopic Holography for Estimating Tumor Resection Cavities in Model-Based Image-Guided Neurosurgery Journal Article
In: IEEE Trans. Biomed. Eng., vol. 61, no. 6, pp. 1833-1843, 2014.
Model-Based Correction of Tissue Compression for Tracked Ultrasound in Soft Tissue Image-Guided Surgery Journal Article
In: Ultrasound Med. Biol., vol. 40, no. 4, pp. 788-803, 2014.
Texture feature analysis for prediction of postoperative liver failure prior to surgery Journal Article
In: Medical Imaging, vol. 2014: Image Processing, SPIE, pp. 278-283, 2014.
Chemotherapy induced splenic volume increase is associated with major complications after hepatic resection for metastatic colorectal cancer Journal Article
In: J. Am. Coll. Surg., vol. 219, no. 4, pp. e115, 2014.
Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models Journal Article
In: IEEE J. Transl. Eng. Health Med., vol. 2, pp. 1-13, 2014.
A Mechanics-Based Nonrigid Registration Method for Liver Surgery Using Sparse Intraoperative Data Journal Article
In: IEEE Trans. Med. Imaging, vol. 33, no. 1, pp. 147-158, 2014.
2013
Integrating Retraction Modeling Into an Atlas-Based Framework for Brain Shift Prediction Journal Article
In: IEEE Trans. Biomed. Eng., vol. 60, no. 12, pp. 3494-3504, 2013.
In: Int. J. Med. Robot., vol. 9, no. 2, pp. 190-203, 2013.
Preliminary study of a novel method for conveying corrected image volumes in surgical navigation Journal Article
In: Int. J. Med. Robot., vol. 9, no. 1, pp. 109-118, 2013.
Comparison Study of Intraoperative Surface Acquisition Methods for Surgical Navigation Journal Article
In: IEEE Trans. Biomed. Eng., vol. 60, no. 4, pp. 1090-1099, 2013.
2012
Design and evaluation of an optically-tracked single-CCD laser range scanner Journal Article
In: Med. Phys., vol. 39, no. 2, pp. 636-642, 2012.
Model-Assisted Image-Guided Liver Surgery Using Sparse Intraoperative Data Book Section
In: Mechanobiology, (Ed.): Soft Tissue Biomechanical Modeling for Computer Assisted Surgery, Y. Payan, pp. 7-40, Springer, Heidelberg, 2012.
2011
Tracking of Vessels in Intra-Operative Microscope Video Sequences for Cortical Displacement Estimation Journal Article
In: IEEE Trans. Biomed. Eng., vol. 58, no. 7, pp. 1985-1993, 2011.
2008
Computer-assisted distraction osteogenesis by Ilizarov's method Journal Article
In: Int. J. Med. Robot., vol. 4, no. 4, pp. 310-320, 2008.
COMPUTER-ASSISTED DISTRACTION OSTEOGENESIS USING THE TAYLOR FRAME: INITIAL CLINICAL EXPERIENCES Journal Article
In: Orthop. Proc., vol. 90, pp. 558-558, 2008, (-B, no. SUPP_III).
2007
Innovative Clinical and Biological Applications–III-Proof of Concept of a Simple Computer-Assisted Technique for Correcting Bone Deformities Journal Article
In: Lect. Notes Comput. Sci., vol. 4792, pp. 935-942, 2007.
Proof of Concept of a Simple Computer–Assisted Technique for Correcting Bone Deformities Book Section
In: Computing, Medical Image; Computer-Assiste, (Ed.): Intervention – MICCAI 2007, N. Ayache, S. Ourselin, and A. Maeder,in Lecture Notes in Computer Science, pp. 935-942, Springer, Heidelberg, 2007.
Computation and Validation of Intra- operative Camera Uncertainty Proceedings Article
In: 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, pp. 479-482, 2007.
2006
Computer-assisted distraction osteogenesis by Ilizarov's method: a case report Journal Article
In: Int. J. Comput. Assist. Radiol. Surg., vol. 1, pp. 247, 2006.
Using Registration Uncertainty Visualization in a User Study of a Simple Surgical Task Book Section
In: Computing, Medical Image; Computer-Assiste, (Ed.): Intervention – MICCAI 2006, R. Larsen, M. Nielsen, and J. Sporring,in Lecture Notes in Computer Science, pp. 397-404, Springer, Heidelberg, 2006.
2005
Computer–Assisted Deformity Correction Using the Ilizarov Method Book Section
In: Computing, Medical Image; Computer-Assiste, (Ed.): Intervention – MICCAI 2005, J. S. Duncan and G. Gerig,in Lecture Notes in Computer Science, pp. 459-466, Springer, Heidelberg, 2005.